IL_8WIC_132
3D structure
- PDB id
- 8WIC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, E- tRNA and RafH.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGGAAACG*CUAAGCC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8WIC_132 not in the Motif Atlas
- Geometric match to IL_4WF9_113
- Geometric discrepancy: 0.1897
- The information below is about IL_4WF9_113
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_19048.1
- Basepair signature
- cWW-L-R-L-R-L-cSH-L-R-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
8WIC|1|B|G|23
8WIC|1|B|G|24
8WIC|1|B|G|25
8WIC|1|B|A|26
8WIC|1|B|A|27
8WIC|1|B|A|28
8WIC|1|B|C|29
8WIC|1|B|G|30
*
8WIC|1|B|C|56
8WIC|1|B|U|57
8WIC|1|B|A|58
8WIC|1|B|A|59
8WIC|1|B|G|60
8WIC|1|B|C|61
8WIC|1|B|C|62
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain H
- 50S ribosomal protein L5
- Chain R
- 50S ribosomal protein L18
Coloring options: