IL_8WIC_133

3D structure

PDB id

8WIC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGUUUC*GUCCAAGAG

Length

15 nucleotides

Bulged bases

8WIC|1|A|C|1046, 8WIC|1|A|G|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WIC|1|A|U|959
8WIC|1|A|G|960
8WIC|1|A|U|961
8WIC|1|A|U|962
8WIC|1|A|U|963
8WIC|1|A|C|964
*
8WIC|1|A|G|1043
8WIC|1|A|U|1044
8WIC|1|A|C|1045
8WIC|1|A|C|1046
8WIC|1|A|A|1047
8WIC|1|A|A|1048
8WIC|1|A|G|1049
8WIC|1|A|A|1050
8WIC|1|A|G|1051

Current chains

Chain A

23S rRNA

Nearby chains

Chain 3

50S ribosomal protein L30