IL_8WIF_010
3D structure
- PDB id
- 8WIF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome and RafH.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGCC*GAUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8WIF_010 not in the Motif Atlas
- Homologous match to IL_4LFB_008
- Geometric discrepancy: 0.0785
- The information below is about IL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60988.1
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
8WIF|1|a|C|129
8WIF|1|a|U|130
8WIF|1|a|G|131
8WIF|1|a|C|132
8WIF|1|a|C|133
*
8WIF|1|a|G|227
8WIF|1|a|A|228
8WIF|1|a|U|229
8WIF|1|a|G|230
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain q
- 30S ribosomal protein S16
- Chain r
- 30S ribosomal protein S17
- Chain u
- 30S ribosomal protein S20
Coloring options: