IL_8WIF_029
3D structure
- PDB id
- 8WIF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome and RafH.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAAAAC*GCGUG
- Length
- 12 nucleotides
- Bulged bases
- 8WIF|1|a|U|612
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8WIF_029 not in the Motif Atlas
- Geometric match to IL_8C3A_433
- Geometric discrepancy: 0.2891
- The information below is about IL_8C3A_433
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83023.1
- Basepair signature
- cWW-R-L-R-L-R-L-L-L-L
- Number of instances in this motif group
- 1
Unit IDs
8WIF|1|a|U|585
8WIF|1|a|G|586
8WIF|1|a|A|587
8WIF|1|a|A|588
8WIF|1|a|A|589
8WIF|1|a|A|590
8WIF|1|a|C|591
*
8WIF|1|a|G|609
8WIF|1|a|C|610
8WIF|1|a|G|611
8WIF|1|a|U|612
8WIF|1|a|G|613
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S8
- Chain q
- 30S ribosomal protein S16
Coloring options: