IL_8WRC_051

3D structure

PDB id

8WRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-Resolved Ambient Temperature Kineto-Crystallographic Structure of Initiation Factor in Complex with Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.59 Å

Loop

Sequence

C(5MC)G*CAAG

Length

7 nucleotides

Bulged bases

8WRC|1|A|5MC|1400, 8WRC|1|A|A|1503

QA status

Modified nucleotides: 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8WRC_051 not in the Motif Atlas

Homologous match to IL_4LFB_056

Geometric discrepancy: 0.1335

The information below is about IL_4LFB_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_18228.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

8WRC|1|A|C|1399
8WRC|1|A|5MC|1400
8WRC|1|A|G|1401
*
8WRC|1|A|C|1501
8WRC|1|A|A|1502
8WRC|1|A|A|1503
8WRC|1|A|G|1504

Current chains

Chain A

16S rRNA

Nearby chains