IL_8WRC_053

3D structure

PDB id

8WRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-Resolved Ambient Temperature Kineto-Crystallographic Structure of Initiation Factor in Complex with Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.59 Å

Loop

Sequence

GU(5MC)AC*GAAGUC

Length

11 nucleotides

Bulged bases

8WRC|1|A|A|1492, 8WRC|1|A|A|1493

QA status

Modified nucleotides: 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WRC|1|A|G|1405
8WRC|1|A|U|1406
8WRC|1|A|5MC|1407
8WRC|1|A|A|1408
8WRC|1|A|C|1409
*
8WRC|1|A|G|1491
8WRC|1|A|A|1492
8WRC|1|A|A|1493
8WRC|1|A|G|1494
8WRC|1|A|U|1495
8WRC|1|A|C|1496

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

Small ribosomal subunit protein uS12

Chain W

Translation initiation factor IF-1