IL_8XCH_001
3D structure
- PDB id
- 8XCH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SARS-CoV-2 Replication-Transcription Complex has a dimer-of-dimeric architecture (ddRTC) in pre-capping initiation.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAAAUGC*GCAUUU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8XCH|1|W|G|2
8XCH|1|W|A|3
8XCH|1|W|A|4
8XCH|1|W|A|5
8XCH|1|W|U|6
8XCH|1|W|G|7
8XCH|1|W|C|8
*
8XCH|1|X|G|129
8XCH|1|X|C|130
8XCH|1|X|A|131
8XCH|1|X|U|132
8XCH|1|X|U|133
8XCH|1|X|U|134
Current chains
- Chain W
- RNA (39-MER)
- Chain X
- RNA (39-MER)
Nearby chains
- Chain M
- Helicase
- Chain N
- Helicase
- Chain R
- Non-structural protein 8
- Chain T
- Non-structural protein 8
Coloring options: