IL_8XT0_078

3D structure

PDB id

8XT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome with 5um Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AACACUACG*UAAAACU

Length

16 nucleotides

Bulged bases

8XT0|1|S1|C|496

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT0|1|S1|A|492
8XT0|1|S1|A|493
8XT0|1|S1|C|494
8XT0|1|S1|A|495
8XT0|1|S1|C|496
8XT0|1|S1|U|497
8XT0|1|S1|A|498
8XT0|1|S1|C|499
8XT0|1|S1|G|500
*
8XT0|1|S1|U|511
8XT0|1|S1|A|512
8XT0|1|S1|A|513
8XT0|1|S1|A|514
8XT0|1|S1|A|515
8XT0|1|S1|C|516
8XT0|1|S1|U|517

Current chains

Chain S1

12s rRNA

Nearby chains

Chain SL

Small ribosomal subunit protein uS12m

Chain Sn

Small ribosomal subunit protein mS38