IL_8XT0_083

3D structure

PDB id

8XT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome with 5um Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUGCUCAGC*GCCCAUG

Length

17 nucleotides

Bulged bases

8XT0|1|S1|C|603

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT0|1|S1|C|597
8XT0|1|S1|U|598
8XT0|1|S1|U|599
8XT0|1|S1|G|600
8XT0|1|S1|C|601
8XT0|1|S1|U|602
8XT0|1|S1|C|603
8XT0|1|S1|A|604
8XT0|1|S1|G|605
8XT0|1|S1|C|606
*
8XT0|1|S1|G|692
8XT0|1|S1|C|693
8XT0|1|S1|C|694
8XT0|1|S1|C|695
8XT0|1|S1|A|696
8XT0|1|S1|U|697
8XT0|1|S1|G|698

Current chains

Chain S1

12s rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein uS5m

Chain SN

Small ribosomal subunit protein uS14m

Chain Si

Small ribosomal subunit protein mS33