IL_8XT0_099

3D structure

PDB id

8XT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome with 5um Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GACAAU*AACCC

Length

11 nucleotides

Bulged bases

8XT0|1|S1|C|885

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT0|1|S1|G|869
8XT0|1|S1|A|870
8XT0|1|S1|C|871
8XT0|1|S1|A|872
8XT0|1|S1|A|873
8XT0|1|S1|U|874
*
8XT0|1|S1|A|882
8XT0|1|S1|A|883
8XT0|1|S1|C|884
8XT0|1|S1|C|885
8XT0|1|S1|C|886

Current chains

Chain S1

12s rRNA

Nearby chains

Chain SO

Small ribosomal subunit protein uS15m

Chain Sc

Small ribosomal subunit protein mS27

Chain Sj

Small ribosomal subunit protein mS34