IL_8XT0_102

3D structure

PDB id

8XT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome with 5um Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUCUACAAUCAACCAAC*GUCAUU

Length

23 nucleotides

Bulged bases

8XT0|1|L1|C|723, 8XT0|1|L1|A|736

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT0|1|L1|A|714
8XT0|1|L1|U|715
8XT0|1|L1|C|716
8XT0|1|L1|U|717
8XT0|1|L1|A|718
8XT0|1|L1|C|719
8XT0|1|L1|A|720
8XT0|1|L1|A|721
8XT0|1|L1|U|722
8XT0|1|L1|C|723
8XT0|1|L1|A|724
8XT0|1|L1|A|725
8XT0|1|L1|C|726
8XT0|1|L1|C|727
8XT0|1|L1|A|728
8XT0|1|L1|A|729
8XT0|1|L1|C|730
*
8XT0|1|L1|G|733
8XT0|1|L1|U|734
8XT0|1|L1|C|735
8XT0|1|L1|A|736
8XT0|1|L1|U|737
8XT0|1|L1|U|738

Current chains

Chain L1

16s rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL2m

Chain Lk

Large ribosomal subunit protein mL37

Chain Sf

Large ribosomal subunit protein mL65