IL_8XT1_031

3D structure

PDB id

8XT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosome with 5uM Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUAAUCACUUG*CCUG

Length

16 nucleotides

Bulged bases

8XT1|1|L1|A|931, 8XT1|1|L1|U|937, 8XT1|1|L1|U|956

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT1|1|L1|C|927
8XT1|1|L1|A|928
8XT1|1|L1|U|929
8XT1|1|L1|A|930
8XT1|1|L1|A|931
8XT1|1|L1|U|932
8XT1|1|L1|C|933
8XT1|1|L1|A|934
8XT1|1|L1|C|935
8XT1|1|L1|U|936
8XT1|1|L1|U|937
8XT1|1|L1|G|938
*
8XT1|1|L1|C|954
8XT1|1|L1|C|955
8XT1|1|L1|U|956
8XT1|1|L1|G|957

Current chains

Chain L1

16s rRNA

Nearby chains