IL_8XT1_056

3D structure

PDB id

8XT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosome with 5uM Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUCUACAAUCAACCAAC*GUCAUU

Length

23 nucleotides

Bulged bases

8XT1|1|L1|C|723, 8XT1|1|L1|A|736

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT1|1|L1|A|714
8XT1|1|L1|U|715
8XT1|1|L1|C|716
8XT1|1|L1|U|717
8XT1|1|L1|A|718
8XT1|1|L1|C|719
8XT1|1|L1|A|720
8XT1|1|L1|A|721
8XT1|1|L1|U|722
8XT1|1|L1|C|723
8XT1|1|L1|A|724
8XT1|1|L1|A|725
8XT1|1|L1|C|726
8XT1|1|L1|C|727
8XT1|1|L1|A|728
8XT1|1|L1|A|729
8XT1|1|L1|C|730
*
8XT1|1|L1|G|733
8XT1|1|L1|U|734
8XT1|1|L1|C|735
8XT1|1|L1|A|736
8XT1|1|L1|U|737
8XT1|1|L1|U|738

Current chains

Chain L1

16s rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL2m

Chain Lk

Large ribosomal subunit protein mL37

Chain Sf

Large ribosomal subunit protein mL65