IL_8XT2_005

3D structure

PDB id

8XT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CAAG*CAAAG

Length

9 nucleotides

Bulged bases

8XT2|1|L1|A|222

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT2|1|L1|C|210
8XT2|1|L1|A|211
8XT2|1|L1|A|212
8XT2|1|L1|G|213
*
8XT2|1|L1|C|220
8XT2|1|L1|A|221
8XT2|1|L1|A|222
8XT2|1|L1|A|223
8XT2|1|L1|G|224

Current chains

Chain L1

16s rRNA

Nearby chains

Chain LD

Large ribosomal subunit protein uL4m

Chain LO

Large ribosomal subunit protein uL15m

Chain Li

Large ribosomal subunit protein bL35m

Chain Ll

Large ribosomal subunit protein mL38

Chain Lw

Large ribosomal subunit protein mL49