IL_8XT2_019
3D structure
- PDB id
- 8XT2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAAA*UC
- Length
- 6 nucleotides
- Bulged bases
- 8XT2|1|L1|A|528
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8XT2_019 not in the Motif Atlas
- Homologous match to IL_6PRV_002
- Geometric discrepancy: 0.154
- The information below is about IL_6PRV_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8XT2|1|L1|G|527
8XT2|1|L1|A|528
8XT2|1|L1|A|529
8XT2|1|L1|A|530
*
8XT2|1|L1|U|541
8XT2|1|L1|C|542
Current chains
- Chain L1
- 16s rRNA
Nearby chains
- Chain L3
- Large ribosomal subunit protein mL53
- Chain L4
- Large ribosomal subunit protein mL54
- Chain LK
- Large ribosomal subunit protein uL11m
- Chain Lj
- Large ribosomal subunit protein bL36m
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