IL_8XT2_094

3D structure

PDB id

8XT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CACCC*GACAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT2|1|S1|C|844
8XT2|1|S1|A|845
8XT2|1|S1|C|846
8XT2|1|S1|C|847
8XT2|1|S1|C|848
*
8XT2|1|S1|G|907
8XT2|1|S1|A|908
8XT2|1|S1|C|909
8XT2|1|S1|A|910
8XT2|1|S1|A|911
8XT2|1|S1|G|912

Current chains

Chain S1

12s rRNA

Nearby chains

Chain L1

Large subunit ribosomal RNA; LSU rRNA

Chain SL

Small ribosomal subunit protein uS12m

Chain Sn

Small ribosomal subunit protein mS38