IL_8XT2_098

3D structure

PDB id

8XT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CAAA*UACG

Length

8 nucleotides

Bulged bases

8XT2|1|S1|A|866

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT2|1|S1|C|864
8XT2|1|S1|A|865
8XT2|1|S1|A|866
8XT2|1|S1|A|867
*
8XT2|1|S1|U|888
8XT2|1|S1|A|889
8XT2|1|S1|C|890
8XT2|1|S1|G|891

Current chains

Chain S1

12s rRNA

Nearby chains

Chain LN

Large ribosomal subunit protein uL14m

Chain LS

Large ribosomal subunit protein bL19m

Chain SO

Small ribosomal subunit protein uS15m

Chain Sj

Small ribosomal subunit protein mS34

Chain Sn

Small ribosomal subunit protein mS38