IL_8XU8_058

3D structure

PDB id

8XU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUAAGGA*UUU

Length

10 nucleotides

Bulged bases

8XU8|1|2|G|1228

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XU8|1|2|A|1224
8XU8|1|2|U|1225
8XU8|1|2|A|1226
8XU8|1|2|A|1227
8XU8|1|2|G|1228
8XU8|1|2|G|1229
8XU8|1|2|A|1230
*
8XU8|1|2|U|1257
8XU8|1|2|U|1258
8XU8|1|2|U|1259

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SC

Small ribosomal subunit protein eS10A

Chain SD

Small ribosomal subunit protein eS12

Chain SN

Small ribosomal subunit protein eS31