IL_8XU8_089

3D structure

PDB id

8XU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAGAAG*CAUCUC

Length

12 nucleotides

Bulged bases

8XU8|1|2|C|1709, 8XU8|1|2|U|1710

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XU8|1|2|G|1690
8XU8|1|2|A|1691
8XU8|1|2|G|1692
8XU8|1|2|A|1693
8XU8|1|2|A|1694
8XU8|1|2|G|1695
*
8XU8|1|2|C|1706
8XU8|1|2|A|1707
8XU8|1|2|U|1708
8XU8|1|2|C|1709
8XU8|1|2|U|1710
8XU8|1|2|C|1711

Current chains

Chain 2

18S rRNA

Nearby chains

Chain ST

Small ribosomal subunit protein eS6A

Chain Y

Large ribosomal subunit protein eL24A