IL_8XU8_123

3D structure

PDB id

8XU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGUAUC*GAAG

Length

10 nucleotides

Bulged bases

8XU8|1|A|U|979, 8XU8|1|A|A|980, 8XU8|1|A|A|1103

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XU8|1|A|C|977
8XU8|1|A|G|978
8XU8|1|A|U|979
8XU8|1|A|A|980
8XU8|1|A|U|981
8XU8|1|A|C|982
*
8XU8|1|A|G|1101
8XU8|1|A|A|1102
8XU8|1|A|A|1103
8XU8|1|A|G|1104

Current chains

Chain A

25S rRNA

Nearby chains

Chain I

Large ribosomal subunit protein uL30A

Chain S

Large ribosomal subunit protein eL18A

Chain d

Large ribosomal subunit protein eL29