IL_8XU8_151

3D structure

PDB id

8XU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAUU*AGUUUUC

Length

12 nucleotides

Bulged bases

8XU8|1|A|U|1821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XU8|1|A|G|1623
8XU8|1|A|G|1624
8XU8|1|A|A|1625
8XU8|1|A|U|1626
8XU8|1|A|U|1627
*
8XU8|1|A|A|1816
8XU8|1|A|G|1817
8XU8|1|A|U|1818
8XU8|1|A|U|1819
8XU8|1|A|U|1820
8XU8|1|A|U|1821
8XU8|1|A|C|1822

Current chains

Chain A

25S rRNA

Nearby chains

Chain b

Large ribosomal subunit protein eL27A

Chain i

Large ribosomal subunit protein eL34A