IL_8XU8_181

3D structure

PDB id

8XU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAUAGA*UUUAUAG

Length

13 nucleotides

Bulged bases

8XU8|1|A|U|2498, 8XU8|1|A|A|2500

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XU8|1|A|C|2444
8XU8|1|A|A|2445
8XU8|1|A|U|2446
8XU8|1|A|A|2447
8XU8|1|A|G|2448
8XU8|1|A|A|2449
*
8XU8|1|A|U|2497
8XU8|1|A|U|2498
8XU8|1|A|U|2499
8XU8|1|A|A|2500
8XU8|1|A|U|2501
8XU8|1|A|A|2502
8XU8|1|A|G|2503

Current chains

Chain A

25S rRNA

Nearby chains

Chain SQ

Small ribosomal subunit protein eS1A

Chain k

Large ribosomal subunit protein eL36A