IL_8XU8_182

3D structure

PDB id

8XU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AGGGUGUAGAAUAAGUGG*CCACUACCU

Length

27 nucleotides

Bulged bases

8XU8|1|A|U|2453, 8XU8|1|A|U|2460, 8XU8|1|A|A|2461

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XU8|1|A|A|2449
8XU8|1|A|G|2450
8XU8|1|A|G|2451
8XU8|1|A|G|2452
8XU8|1|A|U|2453
8XU8|1|A|G|2454
8XU8|1|A|U|2455
8XU8|1|A|A|2456
8XU8|1|A|G|2457
8XU8|1|A|A|2458
8XU8|1|A|A|2459
8XU8|1|A|U|2460
8XU8|1|A|A|2461
8XU8|1|A|A|2462
8XU8|1|A|G|2463
8XU8|1|A|U|2464
8XU8|1|A|G|2465
8XU8|1|A|G|2466
*
8XU8|1|A|C|2489
8XU8|1|A|C|2490
8XU8|1|A|A|2491
8XU8|1|A|C|2492
8XU8|1|A|U|2493
8XU8|1|A|A|2494
8XU8|1|A|C|2495
8XU8|1|A|C|2496
8XU8|1|A|U|2497

Current chains

Chain A

25S rRNA

Nearby chains