IL_8XU8_183

3D structure

PDB id

8XU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAG*CGCCAGUGAAAUAC

Length

18 nucleotides

Bulged bases

8XU8|1|A|A|2480

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XU8|1|A|G|2466
8XU8|1|A|G|2467
8XU8|1|A|A|2468
8XU8|1|A|G|2469
*
8XU8|1|A|C|2476
8XU8|1|A|G|2477
8XU8|1|A|C|2478
8XU8|1|A|C|2479
8XU8|1|A|A|2480
8XU8|1|A|G|2481
8XU8|1|A|U|2482
8XU8|1|A|G|2483
8XU8|1|A|A|2484
8XU8|1|A|A|2485
8XU8|1|A|A|2486
8XU8|1|A|U|2487
8XU8|1|A|A|2488
8XU8|1|A|C|2489

Current chains

Chain A

25S rRNA

Nearby chains