IL_8XZ3_043
3D structure
- PDB id
- 8XZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mycobacterium smegmatis 50S ribosomal subunit with Erythromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUAAGUG*CUCAAG
- Length
- 13 nucleotides
- Bulged bases
- 8XZ3|1|A|C|1260, 8XZ3|1|A|A|1262
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8XZ3_043 not in the Motif Atlas
- Geometric match to IL_7RQB_039
- Geometric discrepancy: 0.1172
- The information below is about IL_7RQB_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.3
- Basepair signature
- cWW-cSH-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 5
Unit IDs
8XZ3|1|A|C|1136
8XZ3|1|A|U|1137
8XZ3|1|A|A|1138
8XZ3|1|A|A|1139
8XZ3|1|A|G|1140
8XZ3|1|A|U|1141
8XZ3|1|A|G|1142
*
8XZ3|1|A|C|1258
8XZ3|1|A|U|1259
8XZ3|1|A|C|1260
8XZ3|1|A|A|1261
8XZ3|1|A|A|1262
8XZ3|1|A|G|1263
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- Large ribosomal subunit protein uL6
- Chain K
- Large ribosomal subunit protein uL13
- Chain f
- 50S ribosomal protein L36
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