IL_8Y0U_038
3D structure
- PDB id
- 8Y0U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- dormant ribosome with STM1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.59 Å
Loop
- Sequence
- AGU*AU
- Length
- 5 nucleotides
- Bulged bases
- 8Y0U|1|C1|G|984
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Y0U_038 not in the Motif Atlas
- Homologous match to IL_5TBW_037
- Geometric discrepancy: 0.1414
- The information below is about IL_5TBW_037
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
8Y0U|1|C1|A|983
8Y0U|1|C1|G|984
8Y0U|1|C1|U|985
*
8Y0U|1|C1|A|1099
8Y0U|1|C1|U|1100
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain LF
- Large ribosomal subunit protein uL30A
- Chain LT
- Large ribosomal subunit protein eL21A
- Chain Lb
- Large ribosomal subunit protein eL29
Coloring options: