IL_8Y0U_100

3D structure

PDB id

8Y0U (explore in PDB, NAKB, or RNA 3D Hub)

Description

dormant ribosome with STM1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GGAG*CGCCAGUGAAAUAC

Length

18 nucleotides

Bulged bases

8Y0U|1|C1|U|2487

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0U|1|C1|G|2466
8Y0U|1|C1|G|2467
8Y0U|1|C1|A|2468
8Y0U|1|C1|G|2469
*
8Y0U|1|C1|C|2476
8Y0U|1|C1|G|2477
8Y0U|1|C1|C|2478
8Y0U|1|C1|C|2479
8Y0U|1|C1|A|2480
8Y0U|1|C1|G|2481
8Y0U|1|C1|U|2482
8Y0U|1|C1|G|2483
8Y0U|1|C1|A|2484
8Y0U|1|C1|A|2485
8Y0U|1|C1|A|2486
8Y0U|1|C1|U|2487
8Y0U|1|C1|A|2488
8Y0U|1|C1|C|2489

Current chains

Chain C1

25S rRNA

Nearby chains

Chain SZ

Small ribosomal subunit protein eS25A