IL_8Y0U_107

3D structure

PDB id

8Y0U (explore in PDB, NAKB, or RNA 3D Hub)

Description

dormant ribosome with STM1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

UUGUG*UUUUUG

Length

11 nucleotides

Bulged bases

8Y0U|1|C1|U|2860

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0U|1|C1|U|2826
8Y0U|1|C1|U|2827
8Y0U|1|C1|G|2828
8Y0U|1|C1|U|2829
8Y0U|1|C1|G|2830
*
8Y0U|1|C1|U|2858
8Y0U|1|C1|U|2859
8Y0U|1|C1|U|2860
8Y0U|1|C1|U|2861
8Y0U|1|C1|U|2862
8Y0U|1|C1|G|2863

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LI

Large ribosomal subunit protein uL16