IL_8Y0U_180

3D structure

PDB id

8Y0U (explore in PDB, NAKB, or RNA 3D Hub)

Description

dormant ribosome with STM1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

ACGUUUGG*CCAUCGU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0U|1|C2|A|817
8Y0U|1|C2|C|818
8Y0U|1|C2|G|819
8Y0U|1|C2|U|820
8Y0U|1|C2|U|821
8Y0U|1|C2|U|822
8Y0U|1|C2|G|823
8Y0U|1|C2|G|824
*
8Y0U|1|C2|C|848
8Y0U|1|C2|C|849
8Y0U|1|C2|A|850
8Y0U|1|C2|U|851
8Y0U|1|C2|C|852
8Y0U|1|C2|G|853
8Y0U|1|C2|U|854

Current chains

Chain C2

18S rRNA

Nearby chains

Chain LR

Large ribosomal subunit protein eL19A

Chain SH

40S ribosomal protein S7-A

Chain SL

Small ribosomal subunit protein uS17A