IL_8Y0U_216
3D structure
- PDB id
- 8Y0U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- dormant ribosome with STM1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.59 Å
Loop
- Sequence
- GGGAUA*UUCAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Y0U_216 not in the Motif Atlas
- Homologous match to IL_4V88_462
- Geometric discrepancy: 0.1186
- The information below is about IL_4V88_462
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82488.1
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
8Y0U|1|C2|G|1540
8Y0U|1|C2|G|1541
8Y0U|1|C2|G|1542
8Y0U|1|C2|A|1543
8Y0U|1|C2|U|1544
8Y0U|1|C2|A|1545
*
8Y0U|1|C2|U|1566
8Y0U|1|C2|U|1567
8Y0U|1|C2|C|1568
8Y0U|1|C2|A|1569
8Y0U|1|C2|A|1570
8Y0U|1|C2|C|1571
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain ST
- Small ribosomal subunit protein eS19A
- Chain SZ
- Small ribosomal subunit protein eS25A
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