IL_8Y0U_255

3D structure

PDB id

8Y0U (explore in PDB, NAKB, or RNA 3D Hub)

Description

dormant ribosome with STM1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GAAAAAAUUA*UAUAUUAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0U|1|C2|G|751
8Y0U|1|C2|A|752
8Y0U|1|C2|A|753
8Y0U|1|C2|A|754
8Y0U|1|C2|A|755
8Y0U|1|C2|A|756
8Y0U|1|C2|A|757
8Y0U|1|C2|U|758
8Y0U|1|C2|U|759
8Y0U|1|C2|A|760
*
8Y0U|1|C2|U|790
8Y0U|1|C2|A|791
8Y0U|1|C2|U|792
8Y0U|1|C2|A|793
8Y0U|1|C2|U|794
8Y0U|1|C2|U|795
8Y0U|1|C2|A|796
8Y0U|1|C2|G|797
8Y0U|1|C2|C|798

Current chains

Chain C2

18S rRNA

Nearby chains

Chain SE

40S ribosomal protein S4-A

Chain SJ

40S ribosomal protein S9-A

Chain SL

Small ribosomal subunit protein uS17A

Chain SW

40S ribosomal protein S22-A