IL_8Y0W_035

3D structure

PDB id

8Y0W (explore in PDB, NAKB, or RNA 3D Hub)

Description

dormant ribosome with eIF5A, eEF2 and SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

8Y0W|1|L5|A|932, 8Y0W|1|L5|C|934, 8Y0W|1|L5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0W|1|L5|A|732
8Y0W|1|L5|A|733
8Y0W|1|L5|G|734
8Y0W|1|L5|G|735
*
8Y0W|1|L5|C|928
8Y0W|1|L5|A|929
8Y0W|1|L5|G|930
8Y0W|1|L5|C|931
8Y0W|1|L5|A|932
8Y0W|1|L5|G|933
8Y0W|1|L5|C|934
8Y0W|1|L5|A|935
8Y0W|1|L5|C|936
8Y0W|1|L5|U|937

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a