IL_8Y0W_274

3D structure

PDB id

8Y0W (explore in PDB, NAKB, or RNA 3D Hub)

Description

dormant ribosome with eIF5A, eEF2 and SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUGGAU*AUCUA

Length

11 nucleotides

Bulged bases

8Y0W|1|S2|U|1721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0W|1|S2|U|1720
8Y0W|1|S2|U|1721
8Y0W|1|S2|G|1722
8Y0W|1|S2|G|1723
8Y0W|1|S2|A|1724
8Y0W|1|S2|U|1725
*
8Y0W|1|S2|A|1809
8Y0W|1|S2|U|1810
8Y0W|1|S2|C|1811
8Y0W|1|S2|U|1812
8Y0W|1|S2|A|1813

Current chains

Chain S2

18S rRNA

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain LV

60S ribosomal protein L23

Chain Ln

60S ribosomal protein L41

Chain SX

40S ribosomal protein S23