IL_8Y0W_280

3D structure

PDB id

8Y0W (explore in PDB, NAKB, or RNA 3D Hub)

Description

dormant ribosome with eIF5A, eEF2 and SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCGGG*CCCUGG

Length

11 nucleotides

Bulged bases

8Y0W|1|S2|C|1774

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0W|1|S2|C|1755
8Y0W|1|S2|C|1756
8Y0W|1|S2|G|1757
8Y0W|1|S2|G|1758
8Y0W|1|S2|G|1759
*
8Y0W|1|S2|C|1772
8Y0W|1|S2|C|1773
8Y0W|1|S2|C|1774
8Y0W|1|S2|U|1775
8Y0W|1|S2|G|1776
8Y0W|1|S2|G|1777

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SG

40S ribosomal protein S6