IL_8Y0X_023

3D structure

PDB id

8Y0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dormant ribosome with SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8Y0X|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0X|1|L5|A|466
8Y0X|1|L5|U|467
8Y0X|1|L5|U|468
8Y0X|1|L5|C|469
8Y0X|1|L5|A|470
8Y0X|1|L5|A|471
8Y0X|1|L5|C|472
*
8Y0X|1|L5|G|682
8Y0X|1|L5|C|683
8Y0X|1|L5|G|684
8Y0X|1|L5|C|685
8Y0X|1|L5|A|686
8Y0X|1|L5|U|687
8Y0X|1|L5|U|688
8Y0X|1|L5|U|689

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Lr

60S ribosomal protein L28