IL_8Y0X_214

3D structure

PDB id

8Y0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dormant ribosome with SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UACAG*CCUGUAA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0X|1|S2|U|530
8Y0X|1|S2|A|531
8Y0X|1|S2|C|532
8Y0X|1|S2|A|533
8Y0X|1|S2|G|534
*
8Y0X|1|S2|C|549
8Y0X|1|S2|C|550
8Y0X|1|S2|U|551
8Y0X|1|S2|G|552
8Y0X|1|S2|U|553
8Y0X|1|S2|A|554
8Y0X|1|S2|A|555

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SJ

40S ribosomal protein S9

Chain Se

40S ribosomal protein S30