IL_8Y36_043

3D structure

PDB id

8Y36 (explore in PDB, NAKB, or RNA 3D Hub)

Description

cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CCCAGACAACUA*UAGUCGAG

Length

20 nucleotides

Bulged bases

8Y36|1|A|A|1090, 8Y36|1|A|U|1097

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y36|1|A|C|1087
8Y36|1|A|C|1088
8Y36|1|A|C|1089
8Y36|1|A|A|1090
8Y36|1|A|G|1091
8Y36|1|A|A|1092
8Y36|1|A|C|1093
8Y36|1|A|A|1094
8Y36|1|A|A|1095
8Y36|1|A|C|1096
8Y36|1|A|U|1097
8Y36|1|A|A|1098
*
8Y36|1|A|U|1149
8Y36|1|A|A|1150
8Y36|1|A|G|1151
8Y36|1|A|U|1152
8Y36|1|A|C|1153
8Y36|1|A|G|1154
8Y36|1|A|A|1155
8Y36|1|A|G|1156

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

Large ribosomal subunit protein bL36

Chain G

Large ribosomal subunit protein uL6