3D structure

PDB id
8Y36 (explore in PDB, NAKB, or RNA 3D Hub)
Description
cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.
Experimental method
ELECTRON MICROSCOPY
Resolution
2.65 Å

Loop

Sequence
CUUUGAAACGUGAG*CUUACGUGGAG
Length
25 nucleotides
Bulged bases
8Y36|1|A|U|2158, 8Y36|1|A|U|2159
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8Y36|1|A|C|2156
8Y36|1|A|U|2157
8Y36|1|A|U|2158
8Y36|1|A|U|2159
8Y36|1|A|G|2160
8Y36|1|A|A|2161
8Y36|1|A|A|2162
8Y36|1|A|A|2163
8Y36|1|A|C|2164
8Y36|1|A|G|2165
8Y36|1|A|U|2166
8Y36|1|A|G|2167
8Y36|1|A|A|2168
8Y36|1|A|G|2169
*
8Y36|1|A|C|2176
8Y36|1|A|U|2177
8Y36|1|A|U|2178
8Y36|1|A|A|2179
8Y36|1|A|C|2180
8Y36|1|A|G|2181
8Y36|1|A|U|2182
8Y36|1|A|G|2183
8Y36|1|A|G|2184
8Y36|1|A|A|2185
8Y36|1|A|G|2186

Current chains

Chain A
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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