IL_8Y36_117
3D structure
- PDB id
- 8Y36 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- AAGCGUGCGAUUGGAUUGCACGUCUAAGCAGUAAGG*CUGAGCUGUGAUGGGGAGAAGACAUUGUGUCUUCGAGU
- Length
- 74 nucleotides
- Bulged bases
- 8Y36|1|A|G|1496, 8Y36|1|A|A|1497, 8Y36|1|A|U|1503, 8Y36|1|A|U|1504, 8Y36|1|A|G|1505, 8Y36|1|A|G|1561, 8Y36|1|A|G|1569, 8Y36|1|A|G|1574, 8Y36|1|A|G|1577, 8Y36|1|A|A|1578, 8Y36|1|A|A|1580, 8Y36|1|A|U|1582, 8Y36|1|A|G|1583, 8Y36|1|A|U|1584, 8Y36|1|A|G|1585
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Y36|1|A|A|1488
8Y36|1|A|A|1489
8Y36|1|A|G|1490
8Y36|1|A|C|1491
8Y36|1|A|G|1492
8Y36|1|A|U|1493
8Y36|1|A|G|1494
8Y36|1|A|C|1495
8Y36|1|A|G|1496
8Y36|1|A|A|1497
8Y36|1|A|U|1498
8Y36|1|A|U|1499
8Y36|1|A|G|1500
8Y36|1|A|G|1501
8Y36|1|A|A|1502
8Y36|1|A|U|1503
8Y36|1|A|U|1504
8Y36|1|A|G|1505
8Y36|1|A|C|1506
8Y36|1|A|A|1507
8Y36|1|A|C|1508
8Y36|1|A|G|1509
8Y36|1|A|U|1510
8Y36|1|A|C|1511
8Y36|1|A|U|1512
8Y36|1|A|A|1513
8Y36|1|A|A|1514
8Y36|1|A|G|1515
8Y36|1|A|C|1516
8Y36|1|A|A|1517
8Y36|1|A|G|1518
8Y36|1|A|U|1519
8Y36|1|A|A|1520
8Y36|1|A|A|1521
8Y36|1|A|G|1522
8Y36|1|A|G|1523
*
8Y36|1|A|C|1557
8Y36|1|A|U|1558
8Y36|1|A|G|1559
8Y36|1|A|A|1560
8Y36|1|A|G|1561
8Y36|1|A|C|1562
8Y36|1|A|U|1563
8Y36|1|A|G|1564
8Y36|1|A|U|1565
8Y36|1|A|G|1566
8Y36|1|A|A|1567
8Y36|1|A|U|1568
8Y36|1|A|G|1569
8Y36|1|A|G|1570
8Y36|1|A|G|1571
8Y36|1|A|G|1572
8Y36|1|A|A|1573
8Y36|1|A|G|1574
8Y36|1|A|A|1575
8Y36|1|A|A|1576
8Y36|1|A|G|1577
8Y36|1|A|A|1578
8Y36|1|A|C|1579
8Y36|1|A|A|1580
8Y36|1|A|U|1581
8Y36|1|A|U|1582
8Y36|1|A|G|1583
8Y36|1|A|U|1584
8Y36|1|A|G|1585
8Y36|1|A|U|1586
8Y36|1|A|C|1587
8Y36|1|A|U|1588
8Y36|1|A|U|1589
8Y36|1|A|C|1590
8Y36|1|A|G|1591
8Y36|1|A|A|1592
8Y36|1|A|G|1593
8Y36|1|A|U|1594
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain L
- Large ribosomal subunit protein bL17
Coloring options: