IL_8Y37_058

3D structure

PDB id

8Y37 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

GCUGAGUA*UACUCGUUAAGGC

Length

21 nucleotides

Bulged bases

8Y37|1|A|U|1551

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y37|1|A|G|1523
8Y37|1|A|C|1524
8Y37|1|A|U|1525
8Y37|1|A|G|1526
8Y37|1|A|A|1527
8Y37|1|A|G|1528
8Y37|1|A|U|1529
8Y37|1|A|A|1530
*
8Y37|1|A|U|1545
8Y37|1|A|A|1546
8Y37|1|A|C|1547
8Y37|1|A|U|1548
8Y37|1|A|C|1549
8Y37|1|A|G|1550
8Y37|1|A|U|1551
8Y37|1|A|U|1552
8Y37|1|A|A|1553
8Y37|1|A|A|1554
8Y37|1|A|G|1555
8Y37|1|A|G|1556
8Y37|1|A|C|1557

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

Large ribosomal subunit protein uL2