IL_8Y37_120

3D structure

PDB id

8Y37 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

AUAAUCGUUUUAAUCGAUG*CUAGAUAGAAAAU

Length

32 nucleotides

Bulged bases

8Y37|1|A|U|1454, 8Y37|1|A|U|1464

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y37|1|A|A|1447
8Y37|1|A|U|1448
8Y37|1|A|A|1449
8Y37|1|A|A|1450
8Y37|1|A|U|1451
8Y37|1|A|C|1452
8Y37|1|A|G|1453
8Y37|1|A|U|1454
8Y37|1|A|U|1455
8Y37|1|A|U|1456
8Y37|1|A|U|1457
8Y37|1|A|A|1458
8Y37|1|A|A|1459
8Y37|1|A|U|1460
8Y37|1|A|C|1461
8Y37|1|A|G|1462
8Y37|1|A|A|1463
8Y37|1|A|U|1464
8Y37|1|A|G|1465
*
8Y37|1|A|C|1624
8Y37|1|A|U|1625
8Y37|1|A|A|1626
8Y37|1|A|G|1627
8Y37|1|A|A|1628
8Y37|1|A|U|1629
8Y37|1|A|A|1630
8Y37|1|A|G|1631
8Y37|1|A|A|1632
8Y37|1|A|A|1633
8Y37|1|A|A|1634
8Y37|1|A|A|1635
8Y37|1|A|U|1636

Current chains

Chain A

23S ribosomal RNA

Nearby chains