IL_8Y38_085

3D structure

PDB id

8Y38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Staphylococcus aureus 70S ribosome (strain 15B196) in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GGAG*CGCUGGUGGGAUAC

Length

18 nucleotides

Bulged bases

8Y38|1|A|U|2194, 8Y38|1|A|A|2198, 8Y38|1|A|U|2199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y38|1|A|G|2151
8Y38|1|A|G|2152
8Y38|1|A|A|2153
8Y38|1|A|G|2154
*
8Y38|1|A|C|2188
8Y38|1|A|G|2189
8Y38|1|A|C|2190
8Y38|1|A|U|2191
8Y38|1|A|G|2192
8Y38|1|A|G|2193
8Y38|1|A|U|2194
8Y38|1|A|G|2195
8Y38|1|A|G|2196
8Y38|1|A|G|2197
8Y38|1|A|A|2198
8Y38|1|A|U|2199
8Y38|1|A|A|2200
8Y38|1|A|C|2201

Current chains

Chain A

23S ribosomal RNA

Nearby chains