IL_8Y38_198

3D structure

PDB id

8Y38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Staphylococcus aureus 70S ribosome (strain 15B196) in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CUUUGAAACGUGA*UUACGUGGAG

Length

23 nucleotides

Bulged bases

8Y38|1|A|U|2157, 8Y38|1|A|U|2158, 8Y38|1|A|U|2159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y38|1|A|C|2156
8Y38|1|A|U|2157
8Y38|1|A|U|2158
8Y38|1|A|U|2159
8Y38|1|A|G|2160
8Y38|1|A|A|2161
8Y38|1|A|A|2162
8Y38|1|A|A|2163
8Y38|1|A|C|2164
8Y38|1|A|G|2165
8Y38|1|A|U|2166
8Y38|1|A|G|2167
8Y38|1|A|A|2168
*
8Y38|1|A|U|2177
8Y38|1|A|U|2178
8Y38|1|A|A|2179
8Y38|1|A|C|2180
8Y38|1|A|G|2181
8Y38|1|A|U|2182
8Y38|1|A|G|2183
8Y38|1|A|G|2184
8Y38|1|A|A|2185
8Y38|1|A|G|2186

Current chains

Chain A

23S ribosomal RNA

Nearby chains