IL_8Y39_016

3D structure

PDB id

8Y39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

cryo-EM structure of Staphylococcus aureus(ATCC 29213) 70S ribosome in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

ACAUUAG*CGAAAAUGU

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y39|1|A|A|332
8Y39|1|A|C|333
8Y39|1|A|A|334
8Y39|1|A|U|335
8Y39|1|A|U|336
8Y39|1|A|A|337
8Y39|1|A|G|338
*
8Y39|1|A|C|386
8Y39|1|A|G|387
8Y39|1|A|A|388
8Y39|1|A|A|389
8Y39|1|A|A|390
8Y39|1|A|A|391
8Y39|1|A|U|392
8Y39|1|A|G|393
8Y39|1|A|U|394

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain S

Large ribosomal subunit protein uL24