IL_8Y39_140

3D structure

PDB id

8Y39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

cryo-EM structure of Staphylococcus aureus(ATCC 29213) 70S ribosome in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAACAUA*UCUUGAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y39|1|a|G|458
8Y39|1|a|A|459
8Y39|1|a|A|460
8Y39|1|a|C|461
8Y39|1|a|A|462
8Y39|1|a|U|463
8Y39|1|a|A|464
*
8Y39|1|a|U|485
8Y39|1|a|C|486
8Y39|1|a|U|487
8Y39|1|a|U|488
8Y39|1|a|G|489
8Y39|1|a|A|490
8Y39|1|a|C|491

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain p

Small ribosomal subunit protein bS16