IL_8Y39_198

3D structure

PDB id

8Y39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

cryo-EM structure of Staphylococcus aureus(ATCC 29213) 70S ribosome in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUUGAAACGUGA*UUACGUGGAG

Length

23 nucleotides

Bulged bases

8Y39|1|A|U|2157, 8Y39|1|A|U|2158, 8Y39|1|A|U|2159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y39|1|A|C|2156
8Y39|1|A|U|2157
8Y39|1|A|U|2158
8Y39|1|A|U|2159
8Y39|1|A|G|2160
8Y39|1|A|A|2161
8Y39|1|A|A|2162
8Y39|1|A|A|2163
8Y39|1|A|C|2164
8Y39|1|A|G|2165
8Y39|1|A|U|2166
8Y39|1|A|G|2167
8Y39|1|A|A|2168
*
8Y39|1|A|U|2177
8Y39|1|A|U|2178
8Y39|1|A|A|2179
8Y39|1|A|C|2180
8Y39|1|A|G|2181
8Y39|1|A|U|2182
8Y39|1|A|G|2183
8Y39|1|A|G|2184
8Y39|1|A|A|2185
8Y39|1|A|G|2186

Current chains

Chain A

23S ribosomal RNA

Nearby chains