IL_8Y5M_008

3D structure

PDB id

8Y5M (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli transcription translation coupling complex in TTC-B state 2 containing mRNA with 27-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and viomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CCUGAAUCA*UGUGAG

Length

15 nucleotides

Bulged bases

8Y5M|1|1|U|276

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y5M|1|1|C|274
8Y5M|1|1|C|275
8Y5M|1|1|U|276
8Y5M|1|1|G|277
8Y5M|1|1|A|278
8Y5M|1|1|A|279
8Y5M|1|1|U|280
8Y5M|1|1|C|281
8Y5M|1|1|A|282
*
8Y5M|1|1|U|358
8Y5M|1|1|G|359
8Y5M|1|1|U|360
8Y5M|1|1|G|361
8Y5M|1|1|A|362
8Y5M|1|1|G|363

Current chains

Chain 1

23S rRNA

Nearby chains