IL_8Y5M_175
3D structure
- PDB id
- 8Y5M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli transcription translation coupling complex in TTC-B state 2 containing mRNA with 27-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and viomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GGAGUGGG*UUCAUGAC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Y5M|1|3|G|1416
8Y5M|1|3|G|1417
8Y5M|1|3|A|1418
8Y5M|1|3|G|1419
8Y5M|1|3|U|1420
8Y5M|1|3|G|1421
8Y5M|1|3|G|1422
8Y5M|1|3|G|1423
*
8Y5M|1|3|U|1477
8Y5M|1|3|U|1478
8Y5M|1|3|C|1479
8Y5M|1|3|A|1480
8Y5M|1|3|U|1481
8Y5M|1|3|G|1482
8Y5M|1|3|A|1483
8Y5M|1|3|C|1484
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain Q
- 30S ribosomal protein S12
- Chain k
- 50S ribosomal protein L14
Coloring options: