IL_8YDF_152
3D structure
- PDB id
- 8YDF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli transcription translation coupling complex in TTC-B state 1 (subclass 2) containing mRNA with 39-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and viomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- GAAG*UGUGCCUUCGGGAAC
- Length
- 19 nucleotides
- Bulged bases
- 8YDF|1|3|U|1030, 8YDF|1|3|G|1032
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8YDF|1|3|G|1003
8YDF|1|3|A|1004
8YDF|1|3|A|1005
8YDF|1|3|G|1006
*
8YDF|1|3|U|1023
8YDF|1|3|G|1024
8YDF|1|3|U|1025
8YDF|1|3|G|1026
8YDF|1|3|C|1027
8YDF|1|3|C|1028
8YDF|1|3|U|1029
8YDF|1|3|U|1030
8YDF|1|3|C|1031
8YDF|1|3|G|1032
8YDF|1|3|G|1033
8YDF|1|3|G|1034
8YDF|1|3|A|1035
8YDF|1|3|A|1036
8YDF|1|3|C|1037
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain S
- 30S ribosomal protein S14
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