IL_8YLD_088
3D structure
- PDB id
- 8YLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 4a (S4a) of yeast 80S ribosome bound to 2 tRNAs and open eEF3 and eEF2 during translocation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UAGAG*CUCAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8YLD|1|2|U|1688
8YLD|1|2|A|1689
8YLD|1|2|G|1690
8YLD|1|2|A|1691
8YLD|1|2|G|1692
*
8YLD|1|2|C|1709
8YLD|1|2|U|1710
8YLD|1|2|C|1711
8YLD|1|2|A|1712
8YLD|1|2|G|1713
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain ST
- Small ribosomal subunit protein eS6A
Coloring options: